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Domain assignment for gi|428217051|ref|YP_007101516.1| from Pseudanabaena sp. PCC 7367

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428217051|ref|YP_007101516.1|
Domain Number 1 Region: 178-278
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain 1.31e-24
Family Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.0011
Further Details:      
 
Domain Number 2 Region: 110-173
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 1.11e-16
Family Mechanosensitive channel protein MscS (YggB), middle domain 0.0016
Further Details:      
 
Domain Number 3 Region: 24-109
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region 0.00000288
Family Mechanosensitive channel protein MscS (YggB), transmembrane region 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|428217051|ref|YP_007101516.1|
Sequence length 297
Comment mechanosensitive ion channel protein MscS [Pseudanabaena sp. PCC 7367]
Sequence
MNALIDEVRESLLDLVGELVKVMPAVLVAIAVLALTAYGVRPITRLTEAAAQRMIENISL
RLLFMQLASITTWIIGIVVAAVIAFPDLRIGDIIAFLGLGSVAVGFAFQDIFKNFLAGII
LLVNEPFEINDQIVVDGYEGTIENITIRSTRLRTYQGEQVIIPNSVVFTNSVQVNTDRPY
LRTDLAIGLDYNTNLAEAREVLLNAIKQAEGVLEVPAPIVDVVSFGASSIDFVVRYWTAP
QKAEVNKAQSNVMIALKAACDEVDYNIPYPIRTLYFFDQDRYNDHYAIDKSSDAAAS
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Identical sequences K9SFW1
WP_015164062.1.5078 gi|428217051|ref|YP_007101516.1|

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