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Domain assignment for gi|428217086|ref|YP_007101551.1| from Pseudanabaena sp. PCC 7367

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428217086|ref|YP_007101551.1|
Domain Number 1 Region: 442-506
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 0.0000000000000017
Family Mechanosensitive channel protein MscS (YggB), middle domain 0.001
Further Details:      
 
Domain Number 2 Region: 516-607
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.00000000000379
Family Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|428217086|ref|YP_007101551.1|
Sequence length 659
Comment mechanosensitive ion channel protein MscS [Pseudanabaena sp. PCC 7367]
Sequence
MKKRTLVLILLAFAVFGLTIAPSIIPSIAPSITTSIATDAGAYSSPARVIVQPSDQISDQ
ISDRGLDPGQVKIAQLLESDNPNSTDNEAESDTITPIATSAIVRLGNQPIFEIKVAAGAT
TAADRAEIISDRIETLANDPLIPLGAIQVGDQGGVTVIFAGDVVLAQITEADAIAANTTV
LELANQSANQINQAVASYRQTNNVGAIATEPGAGWATLPQLFQFINNRNLNIGTTQAILY
AVIATFVFVIVRLIVGSFFGLIINRIDRQRSSQASGIRIREIEFFSADQLIDFVLDITKF
IRFVANLGLFTIYLVFVFSLFPITQKLEAQFWQYLSLALNNGWKAFVDYIPNLFSIFLIG
FVIYYILKFIRPIFRRLGDGSLTIDGFYPEFAQPTYRIIELLVLALTAIVIFPYLPGFGS
PAFRAIALFLGALVSFGSTTAVANGVAGIILIYTRSFQIGDRIKIGNVTGNVEEKMLLVT
RIRTFENTVVTIPNANLLSDNIVNYSATIRDHNTPVLLSTTITIGYDVPWRELEPVLVAA
ALATEHVRSEPRPFVLQLGLGDFSVSYELKVYTDRPTIMELIHSELHRNIQDQCNAAQIE
ILSPVYSAMRDGNKSTIPSEYLPDDYAEPGFNLHPLGNLFQIDLRMGKNRNGGQSDSSP
Download sequence
Identical sequences K9SFZ8
WP_015164097.1.5078 gi|428217086|ref|YP_007101551.1|

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