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Domain assignment for gi|428218836|ref|YP_007103301.1| from Pseudanabaena sp. PCC 7367

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428218836|ref|YP_007103301.1|
Domain Number 1 Region: 28-136
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 3.92e-27
Family Sigma2 domain of RNA polymerase sigma factors 0.00081
Further Details:      
 
Domain Number 2 Region: 154-214
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 5.67e-16
Family Sigma4 domain 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428218836|ref|YP_007103301.1|
Sequence length 220
Comment RNA polymerase, sigma subunit, ECF family [Pseudanabaena sp. PCC 7367]
Sequence
MIRFNQPMTEVWGIPTAIVISASSPVSSSQPESDDYLVQQCLQGNKQSFGQLYQRHQTKV
RSTLYQLCGLDGLDDLVQDVFLRAWKGLSKFKRNAQFSTWLYRITWNVACDRRRAYAKDR
ARSVAVDDEQLQNFTDPEFAGQGSDRNHGLAQLHYQDLVQRGLMQLSIEHRTVLVLHDLE
ELPQKEIAQILGIPVGTVKSRLFHARSSLRKFLESQGVEL
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Identical sequences K9SKY5
WP_015165829.1.5078 gi|428218836|ref|YP_007103301.1|

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