SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|470177534|ref|YP_007563578.1| from Ilumatobacter coccineus

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|470177534|ref|YP_007563578.1|
Domain Number 1 Region: 1-229
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase NM domain-like 9.03e-54
Family Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 0.00032
Further Details:      
 
Domain Number 2 Region: 229-384
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase C-terminal domain-like 4.51e-47
Family Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 0.000054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|470177534|ref|YP_007563578.1|
Sequence length 386
Comment acyl-CoA dehydrogenase [Ilumatobacter coccineus YM16-304]
Sequence
MEFSANPDHEAIVEAVDAVCAQFDDNYWLACDREHRFPWEFYEEMAAGGWVGIAIPEQYG
GGGQGITEAALVLNRIAASGAGMNGSSAVHLTMFGLNPVVKFGSDQLKDAFLPRAAVGDL
HVAFGVTEPDAGTDTSRIATRAADDGRGGFVVTGRKIWTTKALESEVCLLLARTDGEPGS
FEGLSLFLVDLDERYVDIAPIPKVGRNAVASCEVAYDGLPVEGWRLVGERGNGFRHILHG
LNPERILLAGMACGLGEVAVDRAVRYAKEREVFGRPIGANQAIAHPLAQAHMELAAAKTM
MMHAAWRYDNGLDCAEQANTAKYLAAEASFRAADQAMQTLGGLGYAEEYHVERYWREARL
QRLAPVSQEMTCNFIAQKVLGLPRSY
Download sequence
Identical sequences M5AJZ3
gi|470177534|ref|YP_007563578.1| WP_015440887.1.75388

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]