SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|470177653|ref|YP_007563697.1| from Ilumatobacter coccineus

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|470177653|ref|YP_007563697.1|
Domain Number 1 Region: 6-214
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase NM domain-like 4.58e-29
Family Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 0.013
Further Details:      
 
Domain Number 2 Region: 236-381
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase C-terminal domain-like 7.25e-16
Family Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|470177653|ref|YP_007563697.1|
Sequence length 384
Comment putative oxidoreductase [Ilumatobacter coccineus YM16-304]
Sequence
MRRTPEADDATDAWLDKVESIAELAVEHRDRGEADRRMPPELNDALRAAGFARMMVPRHA
GGEQESLTTATRVVEELARLDGSLGWVGWVTIGHGRLADLMSTAATSAVYDHGEGVVAGS
ILNTGTATRVPGGYRLTGQWSFASGCHGADYFLTGGSVVEDGKKVIIDGEPLLLALLLPP
SECEILDTWHTTGLSGTGSHDIRVDDVFVADEFTFRADGVWQVLDSDGVGYGRPYSEYSP
PMMAAVALGIAQHAIDEFKAMVEFKNRQQEMHWMARLPNTNAALGRAEATVQAARSFLYE
NVRLLASLEPGDAAMGLQSQMVGRYVAEQSAVVVDDLYEAGGGFSIYKRNQIERCFRDVR
MVTHHGLISSVTYGNVGQAMTSGS
Download sequence
Identical sequences M4ZZR1
gi|470177653|ref|YP_007563697.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]