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Domain assignment for gi|470178896|ref|YP_007564940.1| from Ilumatobacter coccineus

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|470178896|ref|YP_007564940.1|
Domain Number 1 Region: 151-384
Classification Level Classification E-value
Superfamily DNA ligase/mRNA capping enzyme, catalytic domain 4.32e-42
Family ATP-dependent DNA ligase catalytic domain 0.00044
Further Details:      
 
Domain Number 2 Region: 385-514
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.06e-27
Family DNA ligase/mRNA capping enzyme postcatalytic domain 0.0024
Further Details:      
 
Domain Number 3 Region: 2-195
Classification Level Classification E-value
Superfamily ATP-dependent DNA ligase DNA-binding domain 2.48e-25
Family ATP-dependent DNA ligase DNA-binding domain 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|470178896|ref|YP_007564940.1|
Sequence length 515
Comment putative ATP-dependent DNA ligase [Ilumatobacter coccineus YM16-304]
Sequence
MLFDELAAASQAVAATTKRNDKVMALADALRRCAPDEIVPAVAFLTGTTPLGRIGVGWST
LADVSATPAADASWTVGDVDRRLRAIESLHGDGVGAARRDALAELLDAATEREQRLLRGI
LSGELRQGALAGVMTTAVAKAADVPVAAVRRASMMAGDLGAAAHAALVGGIEALDAVSLQ
PLRPVQPMLASAGSSVADAFSGADAVQVDWKLDGIRLQAHRRGNDVGLFTRNLNEVTDRL
PGVVEVVRSLPGGDLVLDGEAMGLLDDGSPRRFQDTMGDFGADRPDDARPGEGRGDAIGA
FFFDILHVDGSPVHDEALSTRRELLAATVPDTARLPSIITAEVAEAEAFLGRAIAAGHEG
VMVKDLDQPYEAGRRGKGWRKVKPVHTLDLVVLAVEWGHGRRRGMLSNIHLGARASGESA
NEFVMVGKTFKGMTDEMLRWQTARFSDLKIGEGTGRERHVVYVEPVQVVEIAVDGVQVST
TYPGGVALRFARVKQYRHDKSADTADTIDAVRALL
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Identical sequences M5A2M1
WP_015442249.1.75388 gi|470178896|ref|YP_007564940.1|

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