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Domain assignment for gi|501677615|ref|YP_007997441.1| from Pseudomonas protegens CHA0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|501677615|ref|YP_007997441.1|
Domain Number 1 Region: 477-709
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.74e-74
Family ABC transporter ATPase domain-like 0.00000789
Further Details:      
 
Domain Number 2 Region: 159-469
Classification Level Classification E-value
Superfamily ABC transporter transmembrane region 2.62e-50
Family ABC transporter transmembrane region 0.0017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|501677615|ref|YP_007997441.1|
Sequence length 720
Comment leukotoxin translocation ATP-binding protein LktB [Pseudomonas protegens CHA0]
Sequence
MSSVESEVSVQLSHDPRGMHDDPLLDGLLTLCFLHQKPASAAMLTTGLPLPSQRLSAELL
PRAAARAGLQGRVLRRKLEQIPAIAMPALLLLKDGRSAVLLGWQGEDQARLLLSESDGGE
VCVDRQLLADDYSGQVFFAQPQHKFDVNHGSLIPRARSWFRDTLKRSRWLYADAIAASLL
INIIAMAAPLFVMNVYDRVVPNQATSTLWVLSIGIIGAYIFDLILKGLRSLCLDLAGKKT
DLIISATLFERIVGMAMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFL
VIAILGGHLVWIPVLAFPIALCIGYALQKPLVATMEKTMALGAERQSSLIETLAGLDAVK
VNNAESERQYQWEQTIGTLSRLELRVKMLSSLAMNITLLIQQLAGVIMIIFGVYQIIDGN
LSMGGLIACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERPLSRS
VLQGAIECRQLSFTYPGQQNPALKNINLMIKPGEKVGIIGRSGSGKSSLAKLLVGLYQPD
SGALLVDGVDIRQIDVSELRHNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELA
GVHEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPQILLLDEPTSAMDNTGEE
RLKQRLEAVVQSKTVVLVTHRASLLSLVDRLLVVDRGQILADGPKAVVMEALKKGQISVA
Download sequence
Identical sequences A0A2C9EE54
gi|501677615|ref|YP_007997441.1|

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