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Domain assignment for gi|501678150|ref|YP_007997976.1| from Pseudomonas protegens CHA0

Domain architecture

Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  gi|501678150|ref|YP_007997976.1|
Domain Number - Region: 137-196
Classification Level Classification E-value
Superfamily ABC transporter transmembrane region 0.00353
Family ABC transporter transmembrane region 0.033
Further Details:      
Domain Number - Region: 5-80
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0706
Family Mechanosensitive channel protein MscS (YggB), transmembrane region 0.032
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|501678150|ref|YP_007997976.1|
Sequence length 198
Comment membrane protein, MarC family [Pseudomonas protegens CHA0]
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Identical sequences A0A1K2AW81 A0A2C9EFQ4 A0A2K4M3A3 Q4KIX8
220664.PFL_0663 gi|501678150|ref|YP_007997976.1| gi|70734165|ref|YP_257805.1| WP_011059033.1.100210 WP_011059033.1.101844 WP_011059033.1.11424 WP_011059033.1.12653 WP_011059033.1.14038 WP_011059033.1.1721 WP_011059033.1.18072 WP_011059033.1.21308 WP_011059033.1.23266 WP_011059033.1.27351 WP_011059033.1.38500 WP_011059033.1.39301 WP_011059033.1.41899 WP_011059033.1.42452 WP_011059033.1.42693 WP_011059033.1.462 WP_011059033.1.46426 WP_011059033.1.48506 WP_011059033.1.49818 WP_011059033.1.58641 WP_011059033.1.62026 WP_011059033.1.6225 WP_011059033.1.64508 WP_011059033.1.6649 WP_011059033.1.67749 WP_011059033.1.76749 WP_011059033.1.76969 WP_011059033.1.79484 WP_011059033.1.81001 WP_011059033.1.81277 WP_011059033.1.83211 WP_011059033.1.88821 GO.7177

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