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Domain assignment for gi|501680981|ref|YP_008000807.1| from Pseudomonas protegens CHA0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|501680981|ref|YP_008000807.1|
Domain Number 1 Region: 335-563
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.76e-63
Family ABC transporter ATPase domain-like 0.000028
Further Details:      
 
Domain Number 2 Region: 18-320
Classification Level Classification E-value
Superfamily ABC transporter transmembrane region 2.09e-42
Family ABC transporter transmembrane region 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|501680981|ref|YP_008000807.1|
Sequence length 588
Comment putative multidrug export ATP-binding/permease protein YgaD [Pseudomonas protegens CHA0]
Sequence
MIGALLRSLQPAEASLLRRALLAMATSALAQGAALALLPMAFASLFDAAAGQAPWRWAGA
FAGFALLCLGLRRHAQLAGYRAGAAAAQSLNLRIGEQLVRLPLEWFVERRSAELNRLVTH
TVLQIMSTPAHLLQPMANALLTPLALLVALFFYDRTMALAALASVPLLLVFYHWGVRWGG
QAESRSEAAANEAAARVLEFLRQQPLLRASGRTGEGFSLLSEALQQQRRAQRRAHWRTFP
AALGLAVVLQAGYTAMLLCGLYAVLGGSLGVAQYLALAVLATCLVEPMGTLVNLGTTLRQ
TRHGLNRLRHLLRLPALPEPSQPEEPRGHQVQVRDLGLVRQEQVILQGISFELAPASLNL
LVGASGSGKSSLLRLLARFSDVDSGAILLGGVDLHQLSAAQRDRSIALMFQDCPPLAASL
LDNLRLGGPEASDSQLMDAARATGLDLVAQRLPQGWQTRVGEGGVSLSGGERQCLALARV
LLKDASLILLDEPTAALDAISEARVNRCLLQLARKHTVLLVTHKPTLAPSAGQILLLEQG
HLAQRGTHAQLMAAPGRYRELFHEREAINRWRLRQPPSVPQRNVHHDR
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Identical sequences A0A2C9ENR6 A8U048
gi|501680981|ref|YP_008000807.1| WP_015635962.1.27351 WP_015635962.1.76749

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