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Domain assignment for gi|501681978|ref|YP_008001804.1| from Pseudomonas protegens CHA0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|501681978|ref|YP_008001804.1|
Domain Number 1 Region: 362-532
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1.83e-36
Family Histidine kinase 0.0025
Further Details:      
 
Domain Number 2 Region: 291-373
Classification Level Classification E-value
Superfamily Homodimeric domain of signal transducing histidine kinase 4.71e-17
Family Homodimeric domain of signal transducing histidine kinase 0.0022
Further Details:      
 
Domain Number 3 Region: 256-305
Classification Level Classification E-value
Superfamily HAMP domain-like 0.000000103
Family HAMP domain 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|501681978|ref|YP_008001804.1|
Sequence length 536
Comment sensor protein RstB [Pseudomonas protegens CHA0]
Sequence
MNSIFLRIYGGMCAALILVALLGVLALHLLNQVRSEQYRERLAHGTFSLMADNLQPMSEI
ERRRALAVWERLLGIPLSLKTFSQTDLDSSQRGRVLRGQALVEQTGPFAARVYRLVSEKE
QLLLSAEVQQISEQLARATIYLLADELVRYPVAEQPQRLAALKEAKGFGFDMQLSTLDAA
DMDEDQRRRVAEGDTVMALGKGGDSIRVFAGLVGTPWVLEIGPLYQMNPYPPQWLVLIAV
LGLSLIGLIVYLLVRQLERRLSGLESAATRIAKGSLETRVPARGADSVGRLAAAFNGMAE
HLQRLLAIQRELVRAVSHELRTPVARLRFGLEMIASASTDQARQKYLDGMDNDIQDLDRL
VDEMLTYARLEQGSPALNFQRIDLDALINQVISELAPLRANLKVRRGLCLSAAECDGAWV
EAEPRYLHRALQNLVGNAMRHAESQVTVSYQVGQLRCRVDVEDDGPGVPEHAWEKIFTPF
LRLDDSRTRASGGHGLGLSIVRRIIHWHEGRALISKSKNLGGACFSLSWPRHQEPR
Download sequence
Identical sequences A0A1K1VUG8 A0A2C9ERK7 A0A2K2WZX2 Q4K871
gi|501681978|ref|YP_008001804.1| 220664.PFL_4474 WP_011062737.1.101844 WP_011062737.1.11424 WP_011062737.1.14038 WP_011062737.1.1721 WP_011062737.1.18072 WP_011062737.1.21308 WP_011062737.1.23266 WP_011062737.1.27351 WP_011062737.1.38500 WP_011062737.1.39301 WP_011062737.1.41899 WP_011062737.1.42452 WP_011062737.1.42693 WP_011062737.1.462 WP_011062737.1.46426 WP_011062737.1.49818 WP_011062737.1.58641 WP_011062737.1.62026 WP_011062737.1.6225 WP_011062737.1.64508 WP_011062737.1.67749 WP_011062737.1.76749 WP_011062737.1.76969 WP_011062737.1.81001 WP_011062737.1.81277 WP_011062737.1.83211 WP_011062737.1.88821 gi|70731820|ref|YP_261562.1|

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