SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for OB04G29740.1 from Oryza brachyantha 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OB04G29740.1
Domain Number 1 Region: 109-183
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.1e-21
Family B3 DNA binding domain 0.000051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OB04G29740.1
Sequence length 336
Comment pep:novel chromosome:Oryza_brachyantha.v1.4b:4:16534985:16536243:-1 gene:OB04G29740 transcript:OB04G29740.1 description:"Uncharacterized protein "
Sequence
MEFATTSSRFSKGEEEEEEGEQEMEMEQEQDEEEDEVEAEAEASPREIPFMTAAAAATAS
SSSPTSVSPSSAAASTSASGSPFRSSDGAGASGSGGGGGGNDVEVIEKEHMFDKVVTPSD
VGKLNRLVIPKQHAEKYFPLDSAANEKGLLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGW
SRFGFDFRNVNSAVPARQLVFFGSPGIPPHPPLPPPPPPLHFTVQPSPVVTSGLPMVLDS
VPHVNNPAAAAKRVRLFGVNLDNPHPDGGQSSGHGQDANALSLRMPGWQRPAPLRSQELP
PHFSAGAAGAESSAASSPSSSSSSKREAHSSLDLDL
Download sequence
Identical sequences J3M0P9
OB04G29740.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]