SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|407705762|ref|YP_006829347.1| from Bacillus thuringiensis MC28

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|407705762|ref|YP_006829347.1|
Domain Number 1 Region: 145-359
Classification Level Classification E-value
Superfamily Dihydrofolate reductase-like 1.07e-61
Family RibD C-terminal domain-like 0.00000362
Further Details:      
 
Domain Number 2 Region: 4-143
Classification Level Classification E-value
Superfamily Cytidine deaminase-like 6.42e-46
Family Deoxycytidylate deaminase-like 0.00000964
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|407705762|ref|YP_006829347.1|
Sequence length 367
Comment periplasmic binding protein [Bacillus thuringiensis MC28]
Sequence
MLEHELYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMA
GEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKRVIVATLDPNPIVSGRGIKILQDAG
IEVLVGVCEEESKKMNEVFNKYIMTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQE
VHQIRNENAAILVGANTVQKDNPSLTTRIPNGRNSIRIILDSTLRIPMEANVVTDGEAPT
WIFTTSNHAAEKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVNAS
FIENKLMDKIILYFAPKIIGGRLAPSFVEGTGITKMKDAIEFKDISFTQVGKDYRFIGYP
AYRKDEK
Download sequence
Identical sequences A0A2C4FRQ0 K0FPL1
gi|407705762|ref|YP_006829347.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]