SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|340795950|ref|YP_004761413.1| from Corynebacterium variabile DSM 44702

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|340795950|ref|YP_004761413.1|
Domain Number 1 Region: 61-149
Classification Level Classification E-value
Superfamily Ribosomal protein L9 C-domain 6.8e-23
Family Ribosomal protein L9 C-domain 0.00048
Further Details:      
 
Domain Number 2 Region: 1-55
Classification Level Classification E-value
Superfamily L9 N-domain-like 2.09e-16
Family Ribosomal protein L9 N-domain 0.00087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|340795950|ref|YP_004761413.1|
Sequence length 150
Comment 50S ribosomal protein L9 [Corynebacterium variabile DSM 44702]
Sequence
MKLILTAAVDNLGVPGDIVEVKAGYGRNYLLPRGLAITATKGAEAQVENIRRAQADKVIR
DLDHAHEVKAEIDHLQGVSVKVRTSDKGKLFGSINAADIAAAVKAAGGRELDKRTIVLNQ
GDIKATGSYNVDVKLHPQVVASLNFKVVAK
Download sequence
Identical sequences A0A0X2NJZ0 G0HI78
WP_014011462.1.39090 WP_014011462.1.93856 gi|340795950|ref|YP_004761413.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]