SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|428223553|ref|YP_007107650.1| from Geitlerinema sp. PCC 7407

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428223553|ref|YP_007107650.1|
Domain Number 1 Region: 106-275
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 2.16e-46
Family Pentapeptide repeats 0.00025
Further Details:      
 
Domain Number 2 Region: 21-141
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 2.94e-32
Family Pentapeptide repeats 0.0003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428223553|ref|YP_007107650.1|
Sequence length 521
Comment pentapeptide repeat-containing protein [Geitlerinema sp. PCC 7407]
Sequence
MKAEELLKRYGAGERNFGGMDLREANLSRANLSHIDLSGADLSVANLSGANLSGADLRGA
RLNVAKLSGANLSGANLSSCILNVANLVRADLTGANLNQAALIRAELMRADLKQATLDSA
DLGGAQLQEAQLHQANFSRANLSEVNFHRATLADAVFDQANLRGADLNRANATRANFRNA
ELRLANLSEILLIGADLHGANLRWANLTGARLRGADLTEAKLSGAAIVGADLRNVNLTHA
SLIHADLSRANLIGTDWIGAELTGATLTGAKLHGVSRYGLKVEDLTCEWVDLSPQGDNSQ
IQYLSQEDCRQFFNETLPTVQITVDAPLDPDAAVSLAVIYRQIARRSPVMAHPPSIQVGP
RRTVILFQVASNVQLFATAYSAILPFEDAAVTQTNLLEMVRSLQDGSAESNTKTPPETFS
EVLHQLAAQIDGVTILDNLPRLAQRGAFFQTPTQTMLINSSNQRLTVYHHPAFGKRFMSE
VEASPNPTASPLPTPPPQKAAPFLLPPLSVTADFVRHFHDL
Download sequence
Identical sequences K9S321
WP_015170166.1.54702 gi|428223553|ref|YP_007107650.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]