SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|428224291|ref|YP_007108388.1| from Geitlerinema sp. PCC 7407

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428224291|ref|YP_007108388.1|
Domain Number 1 Region: 169-413
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.22e-73
Family Extended AAA-ATPase domain 0.0000000281
Further Details:      
 
Domain Number 2 Region: 423-621
Classification Level Classification E-value
Superfamily FtsH protease domain-like 1.12e-71
Family FtsH protease domain-like 0.00000207
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428224291|ref|YP_007108388.1|
Sequence length 628
Comment membrane protease FtsH catalytic subunit [Geitlerinema sp. PCC 7407]
Sequence
MKFSWRVLLLWTLPALVIGFFLWQGAFSTAPADMGRNTASTRMTYGRFLEYLDADRVQSV
DLYDGGRTAIVEAIDPDLEGRIQRLRVDLPANAPELVTRLRQEHIDFDTHPPSNNGAIWG
LLGNLLFPILLIAGLFFLFRRSNNVPGGPGQAMSFGKSRARFQMEAKTGVMFDDVAGIEE
AKEELQEVVTFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS
EFVEMFVGVGASRVRDLFKRAKENAPCIIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLL
TEMDGFEGNTGIIIIAATNRPDVLDSALLRPGRFDRQVTVDAPDIKGRLEVLEVHARNKK
LAPEVSLDAIARRTPGFTGADLANLLNEAAILTARRRKEAITMLEIDDAVDRVVAGMEGT
PLVDSKSKRLIAYHEVGHAIVGTLVKEHDPVQKVTLVPRGQARGLTWFTPSEDQGLISRS
QILARITGALGGRAAEKVIFGDDEVTTGAGNDLQQVTGMARQMVTRFGMSDLGLLSLEGQ
SSEVFLGRDLMTRSEYSEEIAARVDAQVRTIVEHCYEDACRIMRDNRAVIDRLVDLLIEK
ETIDGEEFRQIVAEYTDVPEKEQYVPQL
Download sequence
Identical sequences K9S5X2
WP_015170903.1.54702 gi|428224291|ref|YP_007108388.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]