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Domain assignment for gi|428224728|ref|YP_007108825.1| from Geitlerinema sp. PCC 7407

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428224728|ref|YP_007108825.1|
Domain Number 1 Region: 1-260
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.59e-28
Family ABC transporter ATPase domain-like 0.001
Further Details:      
 
Domain Number 2 Region: 451-549
Classification Level Classification E-value
Superfamily Rad50 coiled-coil Zn hook 3.14e-23
Family Rad50 coiled-coil Zn hook 0.0063
Further Details:      
 
Domain Number 3 Region: 1-52,801-996
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 7.39e-22
Family ABC transporter ATPase domain-like 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428224728|ref|YP_007108825.1|
Sequence length 1011
Comment exonuclease SbcC [Geitlerinema sp. PCC 7407]
Sequence
MIPKRLTLKCFLSYREATLDFEGLHTACICGPNGAGKSSLLEAIAWALWGESRAAVEDDV
IYMGAKEAQVDFVFEAQGQVYRVIRTRYRGQHSALEFQAQTLEGFRSLTRRGLRATQQLI
LDCLKLDYETFVNSAYLRQGRADEFMLKRPSERKQILADLLKLGQYDELGDRAKDLARQY
KGQIQLLEQSWAQLQEQLALGEAIAADQAQRQADLEQLQQAQDADQAQLQAWQAQQQQRR
SWQQELTWHQQQHQQLLQDVQVLLQEIAAAQGQKEALEVVLAQSEAIAAQYADFQALQAQ
EARQSEKFRQYQQLQHGIQDLQQLIAREASDRQAELGRLETQLEALRQQDLEAQQVLSKQ
GEVEAALAQLTQARQSLADLDQLQMKVAPLAQRRQPLQAQLDRAAARLSARWEELQASAQ
QLQAQQSQQPTLENALVDLTGKLEYLERRRIYRQRVQEKGLERRSFMDRLQAHQRDYETQ
LAELEQKMQLLGEPDALCPLCDRPLDEQHWALVQQKHQATQGELQDLLWVVRQQLAVSER
EIQVLRQEYRDLGRELDQEGLVRERRGQLQQQLQATLEAQRSLAQVQTEMASIERSLQAQ
DYAPQLSEELRLLDETLAQLSYDEKTHALARGQVDRWRWAEIKQAEIKQAQQRRQQLAER
EPQLQAQLVALQEAIAQSQRPDGSPRQQQMTALRQQLANLDYDPDQHNALRQTLRDNQMW
QLRYQELQQAQQQHPELLQRCEVLAERLAARQQDAETVAQQIAQLTTQLTTSPDHAPAIA
QIEQQMHQRRADLDRCLADLGRLQQQQQQLAWMAQQSDEQRRQIVALHHRHRVYRELAQA
FGKNGIQALMIENVLPQLEVETNQILARLSANQLHVQFVTQRAGRRAAKSRSRVTKLIDT
LDILIADTRGTRPFETYSGGEAFRISFAIRLALARLLAQRSGTALRMLIIDEGFGTQDQE
GCDRLIAAINAIAPDFACILTITHMPRFKEAFQSRIEVGKTELGSHLSLHI
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Identical sequences K9S6F7
WP_015171340.1.54702 gi|428224728|ref|YP_007108825.1|

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