SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for HGL_H00000260956-3 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  HGL_H00000260956-3
Domain Number 1 Region: 11-101
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.18e-26
Family La domain 0.00000619
Further Details:      
 
Domain Number 2 Region: 102-169
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000000462
Family Canonical RBD 0.0000619
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000260956-3
Sequence length 172
Comment SSB (Homo_sapiens) Sjogren syndrome antigen B (autoantigen La)
Sequence
MAENGENEKLAALEAKICHQIEYYFGDFNLPQDKFLKEQIKLEEGWVPLEIMIKFNRLNR
LTTDFNVIVEELSKSKAELMEISEDKTKIGRSPNKPLPEVTDEYKNDVKNRSVYIKGFPA
DANLDDIKEWLEDKGQVLNIQMRRTLHKALKGSIFAVFDNIESAKKFVETPG
Download sequence
Identical sequences G5B1K7
HGL_H00000260956-3

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