SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for HGL_H00000262563 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  HGL_H00000262563
Domain Number 1 Region: 4-75
Classification Level Classification E-value
Superfamily RING/U-box 1.22e-18
Family RING finger domain, C3HC4 0.0000121
Further Details:      
 
Domain Number 2 Region: 103-188
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 8.55e-16
Family Canonical RBD 0.0000113
Further Details:      
 
Weak hits

Sequence:  HGL_H00000262563
Domain Number - Region: 192-218
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0188
Family CCCH zinc finger 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000262563
Sequence length 579
Comment CNOT4 (Homo_sapiens) CCR4-NOT transcription complex, subunit 4
Sequence
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHSAASANANSLNSTFSVLPQRFPQFQ
QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP
IAENCYFQRTGTRKTQQGFKDDNTITISKKKVKEADYCL
Download sequence
Identical sequences G5BS13
HGL_H00000262563

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