SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for HGL_H00000309117 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  HGL_H00000309117
Domain Number 1 Region: 120-223
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 7.12e-26
Family Canonical RBD 0.00000952
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000309117
Sequence length 422
Comment RBFOX1 (Homo_sapiens) RNA binding protein, fox-1 homolog (C. elegans) 1
Sequence
MQHPLTGATCVALPNVGMCPQLSCALTFMYLQQGNQEAAAAPDTMAQPYASAQFAPPQNG
IPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQSHSEQSAADNSAQTVSGTATQTDDAA
PTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSK
GFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVG
AVYSPEFYAGTVLLCQANQEGSSMYTAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRG
RAVYNTFRAAAPPPPIPAYGGVVYQEPVYGNKLLQGGYAAYRYAQPTPATAAAYSDSYGR
VYAADPYHHTLAPAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFA
PY
Download sequence
Identical sequences G5B2N0
HGL_H00000309117

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]