SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for HGL_H00000345230-3 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  HGL_H00000345230-3
Domain Number 1 Region: 335-545
Classification Level Classification E-value
Superfamily Tropomyosin 1.64e-70
Family Tropomyosin 0.000000042
Further Details:      
 
Domain Number 2 Region: 246-334
Classification Level Classification E-value
Superfamily Tropomyosin 5.07e-22
Family Tropomyosin 0.0000178
Further Details:      
 
Weak hits

Sequence:  HGL_H00000345230-3
Domain Number - Region: 98-228
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.00043
Family Rhodopsin-like 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000345230-3
Sequence length 545
Comment TPM4 (Homo_sapiens) tropomyosin 4
Sequence
MAKAFSYHELLSSSAPCLAGTIPGRECQGALVKGAAEYVAPVVQAVFRTLSERVPRHGGI
PCAPHPPVLLHLVRQQPRLPACCHGLRPPRSHLALAALLCVRPFTPRLCGLLVSTSWATT
FGNGLTHTVLLTCLSFCAHNRVPRFCDPSPLLKLGCSDTALSSVLVCTMAPCPAPRPSWG
SGLPRAHLCRPAEDALVGGKHRATSSCGSHLSVAGLLCGTRIGVYFSPTPPHTAQQLCRP
AEDALVEEELTHLQKKLSGTEDELDKYAEDLKEAQEKLELTEKKASDAEGDVVALNRRIQ
LVEEELDRAQERLATALQKLEEAEKAADESERVATEQKNSQAEGDVVALNRRIQLVEEEL
DRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQELQLKEAKHIAEEAD
RKYEEVARKLVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKED
KYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLN
ELNCI
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Identical sequences G5C2V2
HGL_H00000345230-3

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