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Domain assignment for HGL_H00000349428-1 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  HGL_H00000349428-1
Domain Number 1 Region: 47-144
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 9.67e-22
Family Canonical RBD 0.00000527
Further Details:      
 
Domain Number 2 Region: 178-278
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.85e-21
Family Canonical RBD 0.00000433
Further Details:      
 
Domain Number 3 Region: 320-411
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 4.07e-18
Family Canonical RBD 0.0000132
Further Details:      
 
Domain Number 4 Region: 434-520
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000000578
Family Canonical RBD 0.00000856
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000349428-1
Sequence length 543
Comment PTBP1 (Homo_sapiens) polypyrimidine tract binding protein 1
Sequence
MDGIIPDIPVGTKWGSDELFSTCVTNGPFIMSSNSASTANGNDSKKFKGDSRSAGVPSRV
IHIRKLPSDVTEGEVISLVLPFGKVTNLLMVKGKNQAFIEMNTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKELKTDSSPNQARAQAALQTVNSVQSGNLALAASVAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHARLS
LDRQNIYNTCCTLSIDFSKLTSLNVKYNYDKSRAGFPPTFDIPQAAGLSVPKVHGALAPL
AIPSAAAAAAVAGRIGIPGLGAAGNSVLLVSNLNPERVTPQSLFILFGVHGDVQRVKILF
NKKENALVQMADGSRAQLAMSHLDGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYG
NSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISISEEDLKSLFSSNGGVVKGFKFFQK
DRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTIYGGLVVGRPGANFRHSRK
KPL
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Identical sequences G5BKI3
HGL_H00000349428-1

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