SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for HGL_H00000365435 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  HGL_H00000365435
Domain Number 1 Region: 17-70
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000000000000182
Family TNF receptor-like 0.0034
Further Details:      
 
Domain Number 2 Region: 89-152
Classification Level Classification E-value
Superfamily TNF receptor-like 0.0000000000089
Family TNF receptor-like 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000365435
Sequence length 420
Comment TNFRSF1B (Homo_sapiens) tumor necrosis factor receptor superfamily, member 1B
Sequence
MFMPYAPESGTKCQVKEYYENTAGMCCSLCQPGQHVKALCTKTSDTVCTPCEESTYTQLW
NWLYTCLSCRSPCSSDQVEIQACTPQQNRVCTCRPGQFCILGSPDSCRQCIPLRKCPPGF
GVVKPGTASSDVHCAPCAPGTFSNTLSSTEVCRPHRKCSSVAIPGNATMDAACAFVSSTL
EAAPGPARTPWSVSQSAEPAEPTPGPSTAPSTALLLPEGPKPPTGKSKNGISLPIGLIVG
LTALGLLVIGLVNCVIVTQRKKKLSCPHREGKRHLPVDKIRGVTGLEQQQLLTTAPSSSS
NSLESSASTATLGAEKPEGSGETRGTFRSSESPPGGHGTQVNVTCIVNVCSSSDHGSQCS
SQATTEDPNASLSGTPEDEQVPFSQEERPFQSWQETPETLLQSLEKPLPFCVPDSGMRLS
Download sequence
Identical sequences G5C4Z9
HGL_H00000365435

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]