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Domain assignment for HGL_H00000371994 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  HGL_H00000371994
Domain Number 1 Region: 978-1178
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.33e-27
Family Reverse transcriptase 0.002
Further Details:      
 
Domain Number 2 Region: 1522-1614
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.000000000127
Family Retroviral integrase, catalytic domain 0.021
Further Details:      
 
Domain Number 3 Region: 1235-1364
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.00000119
Family Ribonuclease H 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000371994
Sequence length 1812
Comment NYNRIN (Homo_sapiens) NYN domain and retroviral integrase containing
Sequence
MLHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFTMTQNWLEELVARLRWGP
APLLTPRGIWEAEVTRAFGALVWIRGDQYAGDLLQLPPAVQELLLSLVRDAAGKEDIIEW
LSHFGISNTCSPVALRSPPQQQKEDSAMVSTGESPGSFLEMGTLQNGGPENPKRLSSLGA
TRSLIPAQSTQQETANQVVRVGSNNQSGTDSDREEGLVRATSSQDSVNHTPALLQQKQVQ
KVEEKFPFQPPVSALGVYPSWKAWAPGPAFGPLWPGTIAAAFWRINQLHSLHLAWLLSQA
CFSLPFWQRPLGPIQLKLPGQSALPLNLEWKQKELAPLPSAESPACRPDGELVYKSTETT
LQNCPRPETPPKVMSLLVVPGGSGEKDKVSPRLPLLASTTQLQAGGERRNQGSLQPDCMW
LEKGPYPASPTEQGVLTAQGRPMAQGGLTAQSAPEAGTVPETLKVPMAAVVPKAENPPLT
QGQPAAPKVPTSQMMPAVSTEPAAPKVPLAPTMPTAQVVSTAQKAAVDQPALASAAQVMS
TTPKTAMAQKMLATKTSPASPKTLKAQTGPVTKMESAAPKASAAPKTSAAPKAPAASKAS
RAPQTPAVQKVPTGTGPTLDVARLLSEVQPSSKGDASLPKGQVEPGRQGVQSSSKHQLLG
GWEGGPRQSPRHPQVNSTVTSFQRYHEALNTPFELNLSGEPGNQELRRVVIDGSSVAMVH
GLQHFFSCRGIAMAVQYFWNRGHREVTVFVPTWQLKKNRRVRESHFLTKLHSLKMLSITP
SQLENGKKIATYDYRFMVKLAEETDGVIVTNEQIHTLMNNSKKLMVKDRLLPFTFAGNLF
MVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASISQLRDDTDPRPLEGP
QNVEEVREEKEERQDEEWREGQGMPGWAEEDDLDSFLASVFRVECPSLSEEILQCLSLHD
PPDGALDIDLLPGVASSYLGIPWDGKAPCQQVLAQLAQLTTPSNFTVLSFFVGFMDSHRD
VIPDYEALMGPLHSLLKQKPDWVWDQEHEKAFLALKRALVSALCLSAPNCQLPFRLQVTV
SQVALTAILYQEHSGKKHPIAYTSKPLLPDEDSEGPQSGGDSPYAVAWALKHFSHCIGDD
PVVLHLVYASRTTVAPEAPECCRVSKAWLIRWSLLVQDRGKRALELALLQGLLGENRLLT
PVSSMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLYVLSPTSPPVSLSFSCS
PYTPTYAHLAAVACGLERCGQSHLPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGAALP
HPSLLSYIISLTSGLSSLPFIYRTSYRSSLFAVTVDNLAKQGAQGSGQWWDLPKDVPVPV
VTSHTMGKRPNLLALQLSDSTLADIIAKLRAGQKLSVSSPFSSAFHSLSLDKESGLLMFK
GDKKPKVWVVPRQLRRDLIFSVHDIPMGAHQRPEETYKKLQLLGWWPGMQEHVKDYCRSC
LFCIPRNLTGSELKVIESPWPLRSTAPWSNLQIEVVGPLTVSEEGHRHVLIVADPNTRWV
EAFPLKPYTHMAVAQVLLQHVFARWGVPVRLEAAQGPQFARHVLVSCGLALGAQVTSLSR
DLQFPCLVSSEAYWEFKRALKEFIFLHGRKWAASLPLLHLAFRASSTEATPFQVLTGAER
RLTEPLWWEMSSANIEGLKMDVFLLQLIGELLELHWRGAEKGTEKADNRRFKQESQEKEW
NVGDQVLLLSLPRNGSSAKWVGPFYIGDRLSLSLYRVWGFPTPEKLGCIYPSSLMKPFAK
SGTPLSFKVLEQ
Download sequence
Identical sequences G5BDS3
HGL_H00000371994

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