SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for HGL_H00000388725-2 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  HGL_H00000388725-2
Domain Number 1 Region: 17-239
Classification Level Classification E-value
Superfamily Ankyrin repeat 1.66e-64
Family Ankyrin repeat 0.00012
Further Details:      
 
Domain Number 2 Region: 421-502
Classification Level Classification E-value
Superfamily Tropomyosin 0.0000301
Family Tropomyosin 0.0039
Further Details:      
 
Weak hits

Sequence:  HGL_H00000388725-2
Domain Number - Region: 840-946
Classification Level Classification E-value
Superfamily t-snare proteins 0.00581
Family t-snare proteins 0.0051
Further Details:      
 
Domain Number - Region: 611-643,691-734
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.00654
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000388725-2
Sequence length 975
Comment RAI14 (Homo_sapiens) retinoic acid induced 14
Sequence
MKSLKAKFRKSDTNEWNKNDDRLLQAVENGDVEKVASLLGKKGASATKQDSEGKTAFHLA
AAKGHVECLRVMFTHGVDVTVQDTTGHSALHLAAKNGHHECIRKLLQSKCPAEGIDSSGK
TALHYAAARGCLQAVQVLYEHKSPVNLKDLDGNIPLLLAVQNGHTEVCCFLLDHGADVNS
RDKNGRTALMLACEIGNLNIVEALIKKGADINLVDSLGHNALHYSKLSENAGIQSLLLSK
ISQDADLKTPTKPKQHEQVSKISSERSGTPKKRKAPPPPISPTQLSDVSSPRSITSTPLS
GKESLFFAEPPFKAEISSIRENKDRLSDSTTGGDSLLDISSEADQQDLLVLLQAKVASLT
LHNKELQDKLQAKSPKDTEGDLSIGSLHSTQSDLAPSLSKPSDADPPDSKSSPSGVTHSA
DSSIRIQQLQESLQDLQKRLESSETERKQLQTELQTRRTELVCLNNTDMSENGSDLSQKL
KETQSKYEEAMKEVLSVQKQMKLGLLSHESVDSYSCLHDLRVTDEKIDVLKRDLQNALEE
SERNKEKVRELEEKLVKREKGAVIKPPVEEYEEMKSSYCSVIENMNKEKVFLFEKYQEAQ
EEIMKLKDTLKIQMTQEASDEAGDMKEAMNRMIDELNKQVSELLQLYKEAQAELEDYRKR
KSLEDVTAEYIHKAEHEKLMQVSNVSRAKAEEALSEMKSQYSKVLNELTQLKQLVDTQKE
NFVSITEHLQVITTLRTTGKEMEETIGRLKEHLASKEVEVAKLEKQLLEEKAAMTNAMVP
RSSYEKLQSSLESEVSVLTLKLKESVKEKEKVHSEVSQVRSEVSQVKREKENIQTLLKSK
EEEVNELLQKFRQAQEEIAEMKRYSESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLS
YSTSSSKRQNQQLEVLQQQVKQLQNQLAECKKHHQEVISVYRMHLLYAVQGQMDEDVQKV
LKQILTMCKNQSQKK
Download sequence
Identical sequences G5BQ94
HGL_H00000388725-2

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