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Domain assignment for HGL_H00000409514-3 from Heterocephalus glaber v1.7-2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  HGL_H00000409514-3
Domain Number 1 Region: 406-463
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.65e-25
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 2 Region: 350-407
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.3e-24
Family Classic zinc finger, C2H2 0.0058
Further Details:      
 
Domain Number 3 Region: 518-575
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.58e-23
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 4 Region: 574-631
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.58e-21
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 5 Region: 462-519
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.62e-20
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 
Domain Number 6 Region: 295-351
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.26e-20
Family Classic zinc finger, C2H2 0.0079
Further Details:      
 
Domain Number 7 Region: 620-672
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000222
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 8 Region: 239-287
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000529
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Weak hits

Sequence:  HGL_H00000409514-3
Domain Number - Region: 1-27
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00157
Family KRAB domain (Kruppel-associated box) 0.0092
Further Details:      
 
Domain Number - Region: 169-216
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0574
Family Classic zinc finger, C2H2 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) HGL_H00000409514-3
Sequence length 677
Comment MIR4273 (Homo_sapiens) microRNA 4273
Sequence
MLETYNNLVALGHCSTKPAVIFKLEQGSGPCMVEEAPSRCFPDVQKVNGRIQTNQENQEK
HFWQVVTTSAEKKVELVKPFNVNSNHISVLNIKNGNYSGVNPEELSIWQNVLLPGDPHEV
RTGEEPVDLNVTGKSFGHPEYLSLHNKIQGIQKHFQYCGQENAYNMKAVLTHKKIHVGET
SSKFNEYGKDFDMLAFISQEMTQARENSVEYNVCHKALYKKAKLNGQKYYESSDLGEPFF
SRLHVTEHQRTHAGDEPYRCNECEKFFCQKTELNMHQRIHREAKLYEDYEGRKNFNQKQN
LSRFLKTQMGEKPYECYMCEKSFYRKSHLNRHQRIHTGEKPYECKECRKTFYHKSSLIIH
QRTHTGEKPYDCTKCGKAFYCKSDLTIHQRTHTGEKPYECEECRKTFYSKSHLTIHQGIH
TGGKPYVCEQCGKTFNRKSNLTVHKRTHTGEKPYECNVCGKSFYRKSHLSTHQGTHRGEK
PYECKECNKTFNHKAALTVHQGTHTGNKPYACKECKKTFLHKSSLTVHQRSHTGNKPYAC
EECRKAFYSKSHLTVHQRTHTGEKPYECQECEKSFHQKSYLSRHQLTHETEKRFECKQCG
KTFYHKASLIIHQRTHTGEKPYECQQCEKSFHKKSNLTRHQITHENEKQLECEKCEKTFS
HKSSFVVHQRTHMEEIV
Download sequence
Identical sequences G5C987
HGL_H00000409514-3

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