SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|392427857|ref|YP_006468851.1| from Desulfosporosinus acidiphilus SJ4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|392427857|ref|YP_006468851.1|
Domain Number 1 Region: 57-147
Classification Level Classification E-value
Superfamily Ribosomal protein L9 C-domain 1.83e-27
Family Ribosomal protein L9 C-domain 0.0000778
Further Details:      
 
Domain Number 2 Region: 1-57
Classification Level Classification E-value
Superfamily L9 N-domain-like 1.12e-17
Family Ribosomal protein L9 N-domain 0.00052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|392427857|ref|YP_006468851.1|
Sequence length 148
Comment LSU ribosomal protein L9P [Desulfosporosinus acidiphilus SJ4]
Sequence
MKVILQADVKGTGKKGQVYEVADGYARNFLFPKKLAVEATTGNIQDISHKKAAEERRKEK
EKEDAVVLGNQLNALQVEVQTKTGEGGRLFGSVTSKEIAEVLKKQHGIEVDKRKLELKDP
IKALGSYEVSVKIHPEVTAKLRVHVSAT
Download sequence
Identical sequences I4DCJ5
WP_014829499.1.101568 gi|392427857|ref|YP_006468851.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]