SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|170932510|ref|NP_079195.3| from Homo sapiens

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|170932510|ref|NP_079195.3|
Domain Number 1 Region: 148-256
Classification Level Classification E-value
Superfamily Second domain of FERM 4.58e-30
Family Second domain of FERM 0.0023
Further Details:      
 
Domain Number 2 Region: 54-148
Classification Level Classification E-value
Superfamily Ubiquitin-like 2.69e-16
Family First domain of FERM 0.01
Further Details:      
 
Domain Number 3 Region: 257-387
Classification Level Classification E-value
Superfamily PH domain-like 0.00000000000000646
Family Third domain of FERM 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|170932510|ref|NP_079195.3|
Sequence length 549
Comment FERM domain-containing protein 1 isoform 1 [Homo sapiens]
Sequence
MAVPPRGRGIDPARTNPDTFPPSGARCMEPSPERPACSQQEPTLGMDAMASEHRDVLVLL
PSREQLRLAVGVKATGRELFQQVCNVASIRDAQFFGLCVVRNNEYIFMDLEQKLSKYFSK
DWKKERNEGNEKPRAPFVAFLRVQHYVENGRVISDHRARHLYYCHLKERVLRSQCAHREE
AYFLLAACALQADLGEHRESAHAGRYFEPHSYFPQWIITKRGIDYILRHMPTLHRERQGL
SPKEAMLCFIQEACRLEDVPVHFFRLHKDKKEGRPTVILGLALRGVHIYQGKKLEIQLDG
LPAAQKLVYYTGCTWRSRHLLHLLRASHQLHLRVRPTLQQLRQREEAEEKQHYRESYISD
ELELDLASRSFPGSGVSSQHCPHCLSRHSADSHGSSYTSGIKANSWLRESREMSVDVPLE
VHGLHEKEPSSSPRTSRSHPSTRGDSQATRQEPCTQVRTRGQSAEAVHQIQEMTAGVSEE
QHSHGLDDMQLHQLALHPAPTSLSHTFHRALDCRLAGPCETRATLPSKRSSNCLALDLFG
EAPPQEFVV
Download sequence
Identical sequences Q8N878
ENSP00000283309 9606.ENSP00000283309 NP_079195.3.87134 NP_079195.3.92137 ENSP00000283309 gi|170932510|ref|NP_079195.3| ENSP00000283309

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]