SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|208022622|ref|NP_001129064.1| from Homo sapiens

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|208022622|ref|NP_001129064.1|
Domain Number 1 Region: 1-91
Classification Level Classification E-value
Superfamily Ubiquitin-like 8.29e-70
Family Ubiquitin-related 0.0094
Further Details:      
 
Domain Number 2 Region: 100-154
Classification Level Classification E-value
Superfamily Zn-binding ribosomal proteins 5.02e-21
Family Ribosomal protein S27a 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|208022622|ref|NP_001129064.1|
Sequence length 156
Comment ubiquitin-40S ribosomal protein S27a precursor [Homo sapiens]
Sequence
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE
CPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
Download sequence
Identical sequences A0A091CM51 A0A096N9H2 A0A0D9RNT7 A0A146MG63 A0A1S3AAY3 A0A1S3FA73 A0A1U7QM01 A0A250YAH1 A0A287AZA7 A0A2J8XCR8 A0A2K5F8V0 A0A2K5H7X5 A0A2K5NW31 A0A2K5SHA2 A0A2K5XY87 A0A2K6CVZ8 A0A2K6FQ75 A0A2K6V6J1 B2RDW1 F1PEZ4 F6Q836 F7GJF2 G1LBG7 G1PW07 G1SK22 G3RVB1 G5B8W4 H2QHX2 I3MDS7 M3WWF6 M3YGD4 P62978 P62979 P62992 Q28FM7 Q4R580 Q6GMC1
ENSP00000272317 ENSSTOP00000008580 ENSOCUP00000003131 ENSP00000272317 ENSP00000383981 ENSP00000385659 ENSMEUP00000008141 ENSAMEP00000004241 ENSSTOP00000008580 3j7p_Sf 3j7r_Sf 4d5l_f 4d61_f 4kzx_f 4kzy_f 4kzz_f 4ug0_Sf 4ujc_Cf 4ujd_Cf 4uje_Bf 5aj0_Bf 5flx_f 5lks_Sf 5lzs_ff 5lzt_ff 5lzu_ff 5lzv_ff 5lzw_ff 5lzx_ff 5lzy_ff 5lzz_ff 5t2c_AH 6d90_gg 6d9j_gg 6ek0_Sf 6g18_f 6g51_f 6g53_f 6hcf_g1 6hcj_g2 6hcm_g1 6hcq_g2 NP_001016172.1.99540 NP_001086065.1.7800 NP_001129064.1.87134 NP_001129064.1.92137 NP_001166537.1.53824 NP_001170884.1.87134 NP_001170884.1.92137 NP_001180515.1.72884 NP_001239157.1.84170 NP_001239528.1.37143 NP_001271613.1.63531 NP_002945.1.87134 NP_002945.1.92137 NP_777203.1.59421 NP_777203.1.76553 XP_001375230.1.35504 XP_001496841.1.31192 XP_001509244.1.37387 XP_002724420.1.1745 XP_002748274.1.60252 XP_002753065.1.60252 XP_002757792.1.60252 XP_003125184.3.46622 XP_003787974.1.62490 XP_003830888.1.60992 XP_003830889.1.60992 XP_003949844.1.37143 XP_003949845.1.37143 XP_003984057.1.62641 XP_004029299.1.27298 XP_004284424.1.21590 XP_004322708.1.83887 XP_004369513.1.4749 XP_004403712.1.74151 XP_004435735.1.5094 XP_004462050.1.11602 XP_004580187.1.84141 XP_004609268.1.94378 XP_004632487.1.9945 XP_004669012.1.11716 XP_004691463.1.23501 XP_004867330.1.39548 XP_005002694.1.53824 XP_005070404.1.91757 XP_005212615.1.76553 XP_005322068.1.77405 XP_005385845.1.28644 XP_005575917.1.63531 XP_005686669.1.57651 XP_005884671.1.60319 XP_005889537.1.15283 XP_005889538.1.15283 XP_005968746.1.78601 XP_006043311.1.26621 XP_006071325.1.26621 XP_006108994.1.53796 XP_006159100.1.99106 XP_006174513.1.101512 XP_006217782.1.17985 XP_006738706.1.47382 XP_006738707.1.47382 XP_006752156.1.47382 XP_006778654.1.95426 XP_006868070.1.41390 XP_006909658.1.64745 XP_006993251.1.50099 XP_007075460.1.5354 XP_007107112.1.24612 XP_007190066.1.59432 XP_007465731.1.90284 XP_007532217.1.11023 XP_007636802.1.28591 XP_007936193.1.48129 XP_007968797.1.81039 XP_008160344.1.99482 XP_008577062.1.73410 XP_008698096.1.72690 XP_008821230.1.79516 XP_010331896.1.74449 XP_010614144.1.5607 XP_010839969.1.44457 XP_010950168.1.22495 XP_010988045.1.51371 XP_011236127.1.58354 XP_011362262.1.92234 XP_011711555.1.29376 XP_011810655.1.43180 XP_011812838.1.43180 XP_011812840.1.43180 XP_011831392.1.47321 XP_011851904.1.47321 XP_011894814.1.92194 XP_012332573.1.9421 XP_012395663.1.9362 XP_012505305.1.63892 XP_012633283.1.48125 XP_012873451.1.60039 XP_012902853.1.14098 XP_014199320.1.60992 XP_014421602.1.101512 XP_014698494.1.49734 XP_014929707.1.86478 XP_014967862.1.72884 XP_015106239.1.17985 XP_015335148.1.40921 XP_016018103.1.101085 XP_016018104.1.101085 XP_016077652.1.3490 XP_017397878.1.71028 XP_017510174.1.32401 XP_018879757.1.27298 XP_019279920.1.44245 XP_019575238.1.88060 XP_019825722.1.53367 XP_020012226.1.5219 XP_020770771.1.74333 XP_020851918.1.61212 XP_021507342.1.76796 XP_021556972.1.83697 ENSOCUP00000003131 ENSGGOP00000007509 ENSMLUP00000015558 ENSP00000272317 ENSP00000383981 ENSP00000385659 ENSSSCP00000028049 ENSPANP00000009290 ENSMMUP00000020417 ENSPTRP00000020489 ENSCJAP00000018460 ENSCJAP00000041400 ENSMPUP00000010391 9544.ENSMMUP00000020417 9598.ENSPTRP00000020489 9606.ENSP00000272317 9823.ENSSSCP00000008967 9823.ENSSSCP00000008971 9986.ENSOCUP00000003131 ENSSSCP00000028049 ENSCPOP00000005248 ENSTTRP00000013220 ENSBTAP00000033015 ENSMEUP00000008141 ENSFCAP00000018695 ENSMLUP00000015558 gi|134254273|gb|AAI35494| gi|62859181|ref|NP_001016172| gi|89268219|gb|CAJ83451| ENSCJAP00000018460 ENSCJAP00000041400 ENSCJAP00000046647 ENSMMUP00000020417 ENSCAFP00000031429 ENSCAFP00000031429 ENSTTRP00000013220 HGL_H00000385659 ENSMPUP00000010391 ENSBTAP00000033015 gi|208022622|ref|NP_001129064.1| gi|294459921|ref|NP_001170884.1| gi|4506713|ref|NP_002945.1| ENSGGOP00000007509 ENSPTRP00000020489 gi|148222699|ref|NP_001086065| gi|49257574|gb|AAH74147| ENSAMEP00000004241

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]