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Domain assignment for gi|28416444|ref|NP_783300.1| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|28416444|ref|NP_783300.1|
Domain Number 1 Region: 32-411
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.58e-72
Family L-arabinose binding protein-like 0.0011
Further Details:      
 
Domain Number 2 Region: 431-545,664-804
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 9.56e-66
Family Phosphate binding protein-like 0.00000000105
Further Details:      
 
Weak hits

Sequence:  gi|28416444|ref|NP_783300.1|
Domain Number - Region: 514-659
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.000746
Family Voltage-gated potassium channels 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|28416444|ref|NP_783300.1|
Sequence length 905
Comment glutamate receptor, ionotropic kainate 1 isoform 2 precursor [Homo sapiens]
Sequence
MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIFETVENEPVNVEELAFKF
AVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQ
SICNALEVPHIQTRWKHPSVDNKDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDS
TGLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEIL
KQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSME
RLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRF
MNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNMTDSNKD
KSSNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYD
VKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISI
LYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSD
VVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLT
VERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVRN
SDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITI
AILQLQEEGKLHMMKEKWWRGNGCPEEDNKEASALGVENIGGIFIVLAAGLVLSVFVAIG
EFIYKSRKNNDIEQCLSFNAIMEELGISLKNQKKIKKKSRTKGKSSFTSILTCHQRRTQR
KETVA
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Identical sequences A0A2J8MQ12
ENSP00000373777 ENSP00000373777 NP_783300.1.87134 NP_783300.1.92137 XP_003813241.1.60992 XP_009424598.1.37143 gi|28416444|ref|NP_783300.1|

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