SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for gi|28605145|ref|NP_000822.2| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|28605145|ref|NP_000822.2|
Domain Number 1 Region: 31-413
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 8.41e-68
Family L-arabinose binding protein-like 0.0047
Further Details:      
 
Domain Number 2 Region: 434-547,666-805
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 1.63e-63
Family Phosphate binding protein-like 0.00000000288
Further Details:      
 
Weak hits

Sequence:  gi|28605145|ref|NP_000822.2|
Domain Number - Region: 569-661
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.000916
Family Voltage-gated potassium channels 0.018
Further Details:      
 
Domain Number - Region: 789-891
Classification Level Classification E-value
Superfamily Tetrahydrobiopterin biosynthesis enzymes-like 0.016
Family DHN aldolase/epimerase 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|28605145|ref|NP_000822.2|
Sequence length 919
Comment glutamate receptor, ionotropic kainate 3 precursor [Homo sapiens]
Sequence
MTAPWRRLRSLVWEYWAGLLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAF
RFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNA
VQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYD
DSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQ
ILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWS
MERLQAAPRSESGLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGG
RFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVA
KGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFS
YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV
SILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG
SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF
LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVK
NNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKIT
IAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAV
GEFVYKLRKTAEREQRSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTDAVINMHTFNDR
RLPGKDSMACSTSLAPVFP
Download sequence
Identical sequences Q13003
NP_000822.2.87134 NP_000822.2.92137 ENSP00000362183 ENSP00000362183 9606.ENSP00000362183 gi|28605145|ref|NP_000822.2| ENSP00000362183

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