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Domain assignment for gi|28866957|ref|NP_789847.1| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|28866957|ref|NP_789847.1|
Domain Number 1 Region: 8-84
Classification Level Classification E-value
Superfamily PDZ domain-like 1.13e-19
Family PDZ domain 0.0000769
Further Details:      
 
Weak hits

Sequence:  gi|28866957|ref|NP_789847.1|
Domain Number - Region: 312-329
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00713
Family LIM domain 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|28866957|ref|NP_789847.1|
Sequence length 366
Comment PDZ and LIM domain protein 2 isoform 1 [Homo sapiens]
Sequence
MALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGM
LHAEAQSKIRQSPSPLRLQLDRSQATSPGQTNGDSSLEVLATRFQGSVRTYTESQSSLRS
SYSSPTSLSPRAGSPFSPPPSSSSLTGEAAISRSFQSLACSPGLPAADRLSYSGRPGSRQ
AGLGRAGDSAVLVLPPSPGPRSSRPSMDSEGGSLLLDEDSEVFKMLQENREGRAAPRQSS
SFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRALATPPKLHTCEKCSTSIANQAVRI
QEGRYRHPGCYTCADCGLNLKMRGHFWEDACAMEGMRLSLEALEGMVEGAKRRDRRKTRR
PIQPSW
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Identical sequences gi|28866957|ref|NP_789847.1| 9606.ENSP00000265810 NP_789847.1.87134 NP_789847.1.92137 ENSP00000265810 ENSP00000265810

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