SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|53759120|ref|NP_653197.2| from Homo sapiens

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|53759120|ref|NP_653197.2|
Domain Number 1 Region: 229-499
Classification Level Classification E-value
Superfamily TPR-like 4.93e-29
Family Tetratricopeptide repeat (TPR) 0.0054
Further Details:      
 
Domain Number 2 Region: 9-73,225-255
Classification Level Classification E-value
Superfamily TPR-like 0.0000329
Family Tetratricopeptide repeat (TPR) 0.02
Further Details:      
 
Weak hits

Sequence:  gi|53759120|ref|NP_653197.2|
Domain Number - Region: 169-231
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 0.0584
Family Phosphate binding protein-like 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|53759120|ref|NP_653197.2|
Sequence length 515
Comment tetratricopeptide repeat protein 8 isoform A [Homo sapiens]
Sequence
MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQEPDPELPVHQAAWILKARALTE
MVYIDEIDVDQEGIAEMMLDENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPIT
GFLRPSTQSGRPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRL
NLTKYSQKPKLAKALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGM
YREAEKQFKSALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLLCGIAR
IYEEMNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEIALRFYRRLLQMGIYNG
QLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLGHVAVGIGDTNLAHQCF
RLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSLAPHMYEPHFNFATISDKIGD
LQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML
Download sequence
Identical sequences ENSP00000339486 ENSP00000370031 NP_653197.2.87134 NP_653197.2.92137 HR5756 ENSP00000370031 9606.ENSP00000370031 gi|53759120|ref|NP_653197.2|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]