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Domain assignment for gi|19743801|ref|NP_598009.1| from Homo sapiens

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|19743801|ref|NP_598009.1|
Domain Number 1 Region: 154-243
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.46e-35
Family SCAN domain 0.0000532
Further Details:      
 
Domain Number 2 Region: 571-628
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.46e-24
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 3 Region: 8-68
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 4.45e-23
Family KRAB domain (Kruppel-associated box) 0.00089
Further Details:      
 
Domain Number 4 Region: 516-572
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.3e-22
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 5 Region: 281-336
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.96e-20
Family KRAB domain (Kruppel-associated box) 0.0015
Further Details:      
 
Domain Number 6 Region: 462-516
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000278
Family Classic zinc finger, C2H2 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|19743801|ref|NP_598009.1|
Sequence length 653
Comment neurotrophin receptor-interacting factor homolog isoform c [Homo sapiens]
Sequence
MASRLPTAWSCEPVTFEDVTLGFTPEEWGLLDLKQKSLYREVMLENYRNLVSVEHQLSKP
DVVSQLEEAEDFWPVERGIPQDTIPEYPELQLDPKLDPLPAESPLMNIEVVEVLTLNQEV
AGPRNAQIQALYAEDGSLSADAPSEQVQQQGKHPGDPEAARQRFRQFRYKDMTGPREALD
QLRELCHQWLQPKARSKEQILELLVLEQFLGALPVKLRTWVESQHPENCQEVVALVEGVT
WMSEEEVLPAGQPAEGTTCCLEVTAQQEEKQEDAAICPVTVLPEEPVTFQDVAVDFSREE
WGLLGPTQRTEYRDVMLETFGHLVSVGWETTLENKELAPNSDIPEEEPAPSLKVQESSRD
CALSSTLEDTLQGGVQEVQDTVLKQMESAQEKDLPQKKHFDNRESQANSGALDTNQVSLQ
KIDNPESQANSGALDTNQVLLHKIPPRKRLRKRDSQVKSMKHNSRVKIHQKSCERQKAKE
GNGCRKTFSRSTKQITFIRIHKGSQVCRCSECGKIFRNPRYFSVHKKIHTGERPYVCQDC
GKGFVQSSSLTQHQRVHSGERPFECQECGRTFNDRSAISQHLRTHTGAKPYKCQDCGKAF
RQSSHLIRHQRTHTGERPYACNKCGKAFTQSSHLIGHQRTHNRTKRKKKQPTS
Download sequence
Identical sequences Q96GC6
gi|19743801|ref|NP_598009.1| ENSP00000478533 ENSP00000484810 NP_598009.1.87134 NP_598009.1.92137

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