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Domain assignment for gi|339444970|ref|YP_004710974.1| from Eggerthella sp. YY7918

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|339444970|ref|YP_004710974.1|
Domain Number 1 Region: 300-490
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.27e-47
Family Ribonuclease PH domain 1-like 0.00000739
Further Details:      
 
Domain Number 2 Region: 5-145
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.42e-40
Family Ribonuclease PH domain 1-like 0.0000345
Further Details:      
 
Domain Number 3 Region: 453-552
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.14e-27
Family Ribonuclease PH domain 2-like 0.0001
Further Details:      
 
Domain Number 4 Region: 146-239
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 7.33e-23
Family Ribonuclease PH domain 2-like 0.0023
Further Details:      
 
Domain Number 5 Region: 557-642
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.33e-19
Family Eukaryotic type KH-domain (KH-domain type I) 0.0032
Further Details:      
 
Domain Number 6 Region: 623-693
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.5e-19
Family Cold shock DNA-binding domain-like 0.00068
Further Details:      
 
Domain Number 7 Region: 250-323
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0000000000968
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|339444970|ref|YP_004710974.1|
Sequence length 748
Comment hypothetical protein EGYY_14230 [Eggerthella sp. YY7918]
Sequence
MKNMEKIVETFELYGKQYRLETGELAKQATGSVVVTQGDTTVLVTAVISKEEKDYDFFPL
TVDFIEKMYAVGRIPGGYLKREARPSDKGTLTARMVDRPIRPGFVDGFKREVHIVCTTLV
VDSVNPPDTICVMGASAALMLGSAPFDGPAACVRIGRNVETGEFIVNPTFEESENSDLEL
TIAGTADYISMVEAGADEISEEDMLAAMSFGQEAIGLFCEAQQRFLDRCNIQTVEWPVHV
ADPAIAERVAAFEGEMAAALRDADKQARMAKVEELKTRIKDEQFSDEERAAWKGDIAAEL
KKLEKKAMRAMVIETGERADGRRPDEIRPLYIVPGYLPRVHGSGLFQRGQTQALSICTLG
MLNEWQRLDTIDPAEGKRYMHQYNFPPYCTGETGRMGAPKRREIGHGALAERALIPVLPS
EDEFPYAIRVVSEVLESNGSSSMASTCGSTLALMDAGVPIKAPVSGIAMGLIKEGDDVVI
LSDIQGLEDFLGDMDFKVCGTEKGITALQMDNKARGLSVEILARALKQASEGRAHILAAM
LETIDAPREELSQYAPRIETIHIPVDKIRDVIGSGGKVVRGIQEETGAHIDIQEDGTIHI
AAIEGPAGDAAKAMILGIVKEPEVGEEFDGEVVGIKDFGAFVKLTPGKDGLLHISRVANG
RVGKVEDVLNLGDIIKVKVLEVDLNSGKISLDRLDKPDAPAGLPASGTGHDRSHDHGNGG
RDNRPGRSSREGRGGNGNGRTPRRRHEG
Download sequence
Identical sequences F7V1D0
gi|339444970|ref|YP_004710974.1|

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