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Domain assignment for gi|428309229|ref|YP_007120206.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428309229|ref|YP_007120206.1|
Domain Number 1 Region: 303-497
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 7.59e-48
Family Ribonuclease PH domain 1-like 0.00000616
Further Details:      
 
Domain Number 2 Region: 4-142
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.72e-43
Family Ribonuclease PH domain 1-like 0.0000286
Further Details:      
 
Domain Number 3 Region: 460-559
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.4e-26
Family Ribonuclease PH domain 2-like 0.00011
Further Details:      
 
Domain Number 4 Region: 143-229
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.53e-26
Family Ribonuclease PH domain 2-like 0.0017
Further Details:      
 
Domain Number 5 Region: 565-650
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.52e-22
Family Eukaryotic type KH-domain (KH-domain type I) 0.0029
Further Details:      
 
Domain Number 6 Region: 230-335
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 3.79e-20
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0031
Further Details:      
 
Domain Number 7 Region: 630-713
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.79e-17
Family Cold shock DNA-binding domain-like 0.0006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428309229|ref|YP_007120206.1|
Sequence length 717
Comment polyribonucleotide nucleotidyltransferase [Microcoleus sp. PCC 7113]
Sequence
MVELDKSISFDGRDIRLKVGLLAPQAGGSVLIQSGDTAVLVTATRAQGREGIDFLPLLVD
YEERLYAAGRIPGGFLRREGRPPEKVTLTSRLIDRPLRPLFPSWLRDDIQIVATTLSMDE
QVPPDVLAVTGASIAVLQAKIPFYGPMAAVRVGLVGDDFIINPTYREIESGDLDLIVAGS
PDGVIMVEAGANQLPEQDIIEAIDFGYEAVRDLIEAQRELMASLGIEVTIAEPPVGDTTL
EQFIRDRATTQIKGILSQFDLDKHSRDTALDEIKANSVVAAIAELPEDEPVRVAATEDDK
AVGKIFKDITKQLMRRQIVEEGVRVDGRKLDEVRPVSCKVGLLPQRVHGSALFNRGLTQV
LSTATLGTPGDAQKLDDLNPEEDKRYLHHYNFPPYSVGETKPMRSPGRREIGHGALAERA
IVPVLPPQEDFPYVLRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPLTKPVSGAAMGLIK
EGDEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKITGLSMDVISEAIKQARPAR
LHILEKMLVALDKPRTELSPFAPRLLTMRIDPDLIGLVIGPGGKTIKGITEQTGAKVDIE
DDGTITVSAVDGEKAKKAINIIQGMTRKLNEGDVYSGRVTRIIPIGAFVELLPGKEGMIH
ISQLADYRVGRVEDEVAVGDEVVVKVREIDSKGRVNLTRLGIHPDEAAAAREAAAMT
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Identical sequences K9W8S1
WP_015180960.1.75295 gi|428309229|ref|YP_007120206.1|

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