SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|428311350|ref|YP_007122327.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428311350|ref|YP_007122327.1|
Domain Number 1 Region: 246-383
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 1.31e-27
Family Pentapeptide repeats 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428311350|ref|YP_007122327.1|
Sequence length 697
Comment low-complexity protein [Microcoleus sp. PCC 7113]
Sequence
MRDPSNIFNFIKSIENKGFTEITYSCLGGEIYTNSDLERFSFKDQVFHIQLYWKFFLLLA
VLLLAIFSGALLGAGSIFSITLLIKYSQSIHGSSVLLSLLVSVFIIYRRGFPLGVIVGIA
SLTPFLLLSTILPTNETGIDIGTSFFTGAGSIVLVASGIAMTGLSMTLAAVVIESIPVAA
VSVFIPTILMAAATMRTFKVMPIVLAMPIVLVAVMLAGHLSWKTVKGNQAFRWMLQIAIA
IAAKGGHTFRGANLTDADFTGATLKLCDLRGANLKRTRLFEAKGLEFSRLGNTYLANPKI
RQLVVTLNGQAQNFDGLNLEGVNLQDANLQDASFIGANLNHANLQNTDLSRAILKQAQLD
GADLTGAILTGACIEDWGITGTTKLEGVRCDYIFMRLETKDNPDRLRKPDNWRETFADGE
FSDFIKPYVDTLDLYHSQDIDPRAISIALKNLSVNHPEEKLQFVAIERRGGNGLNLRFTT
APGADKSELSHEYFTDYARIKKELPIAVQLRLAEQDAEIRTLKGTIEQFIEAGTHQSKIQ
AETIQVIQGELVVTENKGINITSGGGSIGDISGLVGGDVSGVVNLGTISGNVTNTINQLP
DASEPDQPNLKELLTQLQQAIENDSNLSDPDKADLLEQVQVLAEAKQTEEPAKKEGLARK
ARKMFDATLSSLPQTASIVEACSKLLPMVLKALGVSA
Download sequence
Identical sequences K9WGH9
gi|428311350|ref|YP_007122327.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]