SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|428312883|ref|YP_007123860.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428312883|ref|YP_007123860.1|
Domain Number 1 Region: 40-209
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 6.59e-49
Family Pentapeptide repeats 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428312883|ref|YP_007123860.1|
Sequence length 461
Comment low-complexity protein [Microcoleus sp. PCC 7113]
Sequence
MANEEHLSVLRQGVEAWNAWKANNPNIRPNLSFANGKRITIRGAKLSGVDLSRTNLSRAD
LSKADLIGAKLNEANLSEAYLSEADLIGADLTSADLSSADLIGANLIGANLNQAYLSGAD
LTKANLSGADLVGAKLIGAKLSGANLSGAKLIGANLSGAYLRGANLKGANLIDANLIGAN
LSRSNLHRTKALHSNLYKAILTGACLQDWHTNSATNLEDVICDYIYLEAEQKERRPIQGN
FAPGEFTNLFQKTLETVELIFSNGIDWQAFLISFQKVQVKTGILELSLQTIENKNDGTLV
IRLSVPNDINKTEIEQSLQREYEHQLKAIDKIYRYQLQATYEEIATYRRQSIDLIEIVKV
MASQTINVETKHLMDQRSVSDAAAKIQKLLQQLEQTYPTGTPLEKQIVVIEVIKHIESNP
ILKVRVVEALNGVSIEALKKLIDHPLVNVLLAALEEYQEID
Download sequence
Identical sequences K9WKZ2
gi|428312883|ref|YP_007123860.1| WP_015184589.1.75295

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]