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Domain assignment for gi|428313072|ref|YP_007124049.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428313072|ref|YP_007124049.1|
Domain Number 1 Region: 1-256
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.97e-32
Family ABC transporter ATPase domain-like 0.00053
Further Details:      
 
Domain Number 2 Region: 450-549
Classification Level Classification E-value
Superfamily Rad50 coiled-coil Zn hook 2.35e-22
Family Rad50 coiled-coil Zn hook 0.0057
Further Details:      
 
Domain Number 3 Region: 1-52,777-992
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.09e-21
Family ABC transporter ATPase domain-like 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428313072|ref|YP_007124049.1|
Sequence length 1006
Comment exonuclease SbcC [Microcoleus sp. PCC 7113]
Sequence
MIPLQLTLKNFLSYRDAILDFRGLHTACICGPNGAGKSSLLEAITWVIWGQSRAESEDDI
IHAGAKDVRVDFIFQNNQQTHRIIRTRHRGQSSSLEFQIETAGGFRSLTEKGVRATQQLI
LYHLKLDYDTFINSAYLRQGRADEFMLRRPSERKQILADLLKLDQYETLAEQAKDLSRQF
KGQAEQLEQSLQTIKQQLEQRDEILEQQTRLKTTLQQLQQAQEIDQKQLQQLQAVVHQRS
TWQQQLTFVRQQEQNLSQDCDRLTQDIAATEAQQRQLATLLSQEEAIKSGYSQYINLQQQ
EEIFTAKFQAYQEAQQQKQQLQQQLTQQINELNLKIRDTQAQLAALRPQEQEIQDALSRS
GEVSAALEQLHLARKRLVELDHLQLEVSPLLQRHTSLQTELDRAQARLSARLEELYSSEK
QLNAQIAVTPELRQTVLQVGAEIGQLEKKRVYQQRVQEKGLERRHFQERLQENQRRYEKQ
LAELTQKMEMLQVQNAVCPLCDRPLDEAHSHHVIQKTATEHQGVQEQFWLVREQLTVCER
ELQVLRHEYAQLSQELSPYEKLLEQRGQLEARLEATDEVYDRLYELSEEKEQLERSLHAG
AYAVDLQAQLQQIEVQLQQLNYSEQTHALARSEVDRWRWAEIKQAKLEDALKRRRQIEDK
KPQLQAQLDALQGSLHELQTTSELKQQLDALEEHMAQIGYNLAEHNALRASVRQAQSWQL
RYQEVVSAQQQYPQVCQRLQALMQTRQARRTEQEGITAQIESIVKQIEQYPDATPELQAL
ELGMQQRRRQLDEHLSGQGRLQQQLTQLESLQTQYEEEHKQCQELQRQYRVHQELAIAFG
KNGIQALMIENILPQLEAQANHILARLTGNQLHIQFVTQRAGRRASKKTTKLIDTLDILI
ADANGTRPYETYSGGEAFRINFSIRLALARLLAQRAGTSLQMLIVDEGFGTQDAEGCDRL
IAAINAISSDFSCILTVTHMPQFKEAFQTRIEVRKSEQGSQLSLSI
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Identical sequences K9WKE1
gi|428313072|ref|YP_007124049.1| WP_015184778.1.75295

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