SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|428314349|ref|YP_007125326.1| from Microcoleus sp. PCC 7113

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428314349|ref|YP_007125326.1|
Domain Number 1 Region: 86-165
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 4.3e-23
Family Translational machinery components 0.00035
Further Details:      
 
Domain Number 2 Region: 15-82
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 3.66e-19
Family Ribosomal S5 protein, N-terminal domain 0.00036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428314349|ref|YP_007125326.1|
Sequence length 173
Comment 30S ribosomal protein S5 [Microcoleus sp. PCC 7113]
Sequence
MATRRKSNRAKEKETTWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNERGQVGVGVGKAS
DVIGAVRKGVADGKKQLIDVPLTKSNSIPHPSNGAAVGAKVMMRPAAPGTGVIAGGAVRT
VLELAGVRNILAKQLGSNNPLNNARAAVNALDSLRTFSEVAEERGVPIENLYA
Download sequence
Identical sequences K9WND5
WP_015186048.1.75295 gi|428314349|ref|YP_007125326.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]