SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Pavirv00009744m|PACid:23805529 from Panicum virgatum v202

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  Pavirv00009744m|PACid:23805529
Domain Number - Region: 115-140
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0394
Family GARP response regulators 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Pavirv00009744m|PACid:23805529
Sequence length 484
Sequence
MGEVKEKVVMEDGEKRSSEPPAVLDLNEGFSSEGCDGGEIGEDADDDNEEEEDIDDEDGS
TSEVAGAGRSSSSNSSSTNHNSGSNNKDHDMNSSSKGEGGGDRAQTVRQYNRSKLPRLRW
TPDLHMAFVHAVERLGGQEIFSPMDFHMRRGDHPFHDMFFQRAAGSAISSSLLHNGGFIG
SRSAVVSPEASRLYGLLHRRLPTMQTFDFKNYSNLRNQEWTFSQHAVAAARAGTTNDHGP
AKGIIHDMIFRKDGKPTSHLFDVRDAIASNRTLSAAAGAADHGRRVGSSDWIGSSSRPLS
RTMSAAASTGFALGSLHPLSRGRASTGSNGYHPNGDANTTSSEPLVTKKALGSRLEEHLE
PKNPSKVIGEMCTGTAAKRTKASMEDNGGMPDLQLSLSPNVGGDSDKQAKKRRILSIALS
EQEVDSDKMLPLSLSLSLRGGDSGGEGSGGDAGRLEAAIGSSSSKKAALGLSTLDLTMSI
KALE
Download sequence
Identical sequences Pavirv00009744m|PACid:23805529

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]