SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|261414941|ref|YP_003248624.1| from Fibrobacter succinogenes subsp. succinogenes S85

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|261414941|ref|YP_003248624.1|
Domain Number 1 Region: 464-570
Classification Level Classification E-value
Superfamily SpoIIaa-like 1.31e-17
Family Anti-sigma factor antagonist SpoIIaa 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|261414941|ref|YP_003248624.1|
Sequence length 634
Comment sulfate transporter [Fibrobacter succinogenes subsp. succinogenes S85]
Sequence
MSDIHAKESVKQYLTGVVSTITPEIVRSIKRGYTRKDFTSDLMSGLIVGILALPLAIAFA
IASGVGPEQGLYTAIIAGFIISLLGGSRFQIGGPTGAFIVIVYGIVSQYGYDGLASATLL
AGIFLVIFGLAKFGAIIKFIPYPVTVGFTAGIAIIIALGQVPNFFGLTFAGADPADAVGK
IKLYVSSFGSMNVYSVIVGVVALAVCILWPKITTKVPGSLIAIIVATVMVKVLGWDDPVN
GHGVVTIGMKNHIPSGFPVPHLPNISLEMMQKVFQPALTIAMLGAIESLLSAVVADGMTS
TKHRSNTELFGQGVANILSPIFGGIPATGAIARTATNIRNGAVSPISGLVHAVVLLLIML
VLGKYAEMIPMAALAAVLFQVAFNMCGYRSVIKMFKAPKSDVTVMLVAFFLTVIIDLTVA
IEVGVLLAAVLFIKRMSDVAEVEAVSSALKDDDDEAARNTLGRQVPKGVLVYELAGSLFF
GAVDKFKETMNRISEKPKILILRMRSVSSIDAAGINMIEDLLKRCKSEGTQLLLSGVHAQ
PVVALTRAGVLAQLGEENALGNIDAALNRARELLGLPIVDASQEEQKAPTVSWEKSLDKP
WMPEESNAAVAEETPEVIAERMMDEPIKKIEDRK
Download sequence
Identical sequences C9RLY0
WP_012820372.1.27150 WP_012820372.1.74657 gi|261414941|ref|YP_003248624.1| gi|261414941|ref|YP_003248624.1| 59374.Fisuc_0530

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]