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Domain assignment for gi|383451653|ref|YP_005358374.1| from Flavobacterium indicum GPTSA100-9

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|383451653|ref|YP_005358374.1|
Domain Number 1 Region: 277-575
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 5.62e-77
Family DNA repair protein MutS, domain III 0.00000243
Further Details:      
 
Domain Number 2 Region: 576-811
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 7.78e-56
Family ABC transporter ATPase domain-like 0.00000117
Further Details:      
 
Domain Number 3 Region: 123-276
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 5.1e-40
Family DNA repair protein MutS, domain II 0.00051
Further Details:      
 
Domain Number 4 Region: 11-122
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 2.75e-38
Family DNA repair protein MutS, domain I 0.000055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|383451653|ref|YP_005358374.1|
Sequence length 874
Comment DNA mismatch repair protein MutS [Flavobacterium indicum GPTSA100-9]
Sequence
MAKKAATEIKDKAPKETPLMKQYNEIKAKYPDACLLFRVGDFYETFGSDAIRASQILGIT
LTKRGNGSESETALAGFPHHSLNTYLPKLVKAGLRVAICDQLEDPKMTKTIVKRGVTELV
TPGVALNDDILSAKTNNFLASVHFGKKNLGIAFLDVSTGEFLTAQGSEEYIDKLIQNFRP
SEILVTKNHKNTFKSAFGEDHHVFYLEDWIYKEDYAFETLTKHFQTNSLKGFGVEELQEG
IVASGAILYYLSETQHNKIQHITNIQRIAEDAYVWMDKFTIRNLELYHSTNPNAVTLLDV
IDKTLSPMGGRMLKRWIALPLKDIVKIKGRNEVVAYLKENQEDLQAIQYQIKQISDLERL
ISKVATGKISPREVLYLKESLDAIIPIKTLALASKNEALKLIGDSLHACELLREKIEKTI
QPDAPVNINKGNAIAAGIHAELDELRAISSTGKGYLEDLERRESEQTGIPSLKVSFNNVF
GYYIEVRNTHKEKVPETWIRKQTLVSAERYITEELKGYEAKILGAEEKIQQLESQLFEEL
VSWISLYIKAVQLNASLIAQLDGLQSFAQMAIEHNYVKPEINDGFVLDIKEGRHPVIEKQ
LPIGVPYISNDVFLDNETQQMIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAQAVTMG
VVDKVFTRVGASDNISMGESTFMVEMNETASILNNLSDRSLVLLDEIGRGTSTYDGISIA
WAISEYLHEHPGRPKTLFATHYHELNEMESIFERIQNYNVSVKELKDTVLFIRKLVQGGS
AHSFGIHVAKMAGMPQTVIQKAQKLLKKLEKNHSAEELSGGNLGQDEMQLSFFNLDDPLL
EEIKEEINGLDINTLTPVEALMKLNELKRMLSKK
Download sequence
Identical sequences H8XR83
gi|383451653|ref|YP_005358374.1|

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