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Domain assignment for cassava4.1_000609m|PACid:17992784 from Manihot esculenta v147

Domain architecture


Domain assignment details

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Strong hits

Sequence:  cassava4.1_000609m|PACid:17992784
Domain Number 1 Region: 116-255
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.62e-44
Family B3 DNA binding domain 0.0048
Further Details:      
 
Domain Number 2 Region: 1001-1063
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000932
Family PB1 domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_000609m|PACid:17992784
Sequence length 1112
Sequence
MKVPPNGFMANSAEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
MDFIPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVNKYDKEALLASDMGLKQNR
QPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHENAWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVIS
SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPFSKYNKAMYTQVSLGMRFRMMF
ETEESGVRRYMGTITGISDMDPVRWKGSQWRNLQVGWDESTAGERPSRVSVWEIEPVVTP
FYICPPPFFRPKFPKQPGMPDDESDTENAFKRAMPWLGDEFGMKDTPSSIFPGLSLVQWM
SMQQNNQLSAAQAGFFPPMLPSTALHNNFSVDDPSKLLNFQAPGLSVPSLQFNKANPQNQ
VSQLPQQSAWTQQQQLQQLLQTNITQQQPSLPQQEQQQSHPQQQQQRQQPQPQPQQQQQL
SQQQQPQPQPPQLQVQQQQQMFQPPVNNGVVTPNQISNQNSQQQIVYSQLQQQQQLLAST
SQSQNISGANKSPYQLTSLPQDTSFQQQMEQQSNLLQRHQQQTQLQQSPLQLLQQNLAQI
TQQQSQPQPQVQQLSHPGLSEQQLHLQLLQKLQQQQQQQLLSPTSSSLQPQLLQQQQTHQ
QNQQFQQSPLSQSQQQPLGNNSFSTAALMQSQSFPVSQSHGLQKSPTTIRAHSTLTDGDA
PSCSTSPSTNNCQISPSNFLNRNQQTAAILMGDPVAEPANTLVQELNSKSDIRIKHEFPS
SKGTDQLKYKGTMADQLEASSSGTSYCLDAGNIQPNFSLPTFGLDGDVQSHPRNSLPFAT
NIDSLAPDTLLSRGYDSQKDLQNLLTNYGGTPRDIETELSTAALSSQSFGVPNIPFKPGC
SNDVPINDSGVLNGGLWASQTQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFG
IEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSVEVQQMSLDGDLG
SVPVPKQACSGTNSGNAWRGHYDDNSAASFNR
Download sequence
Identical sequences A0A2C9UBW5
cassava4.1_000609m|PACid:17992784

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