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Domain assignment for cassava4.1_001105m|PACid:17990075 from Manihot esculenta v147

Domain architecture


Domain assignment details

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Strong hits

Sequence:  cassava4.1_001105m|PACid:17990075
Domain Number 1 Region: 143-285
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.19e-46
Family B3 DNA binding domain 0.0048
Further Details:      
 
Domain Number 2 Region: 852-918
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000024
Family PB1 domain 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_001105m|PACid:17990075
Sequence length 953
Sequence
MHFKQKHMMMGSVEEKIKAGGLVGGIQTNLLEEMKLLKEIQDHSGTRKTINSELWYACAG
PLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLLCQVHNVTLHADKDT
DEIYAQMSLQPVNSEKDVFPIPDFGLKPSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEK
LFPALDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSIFVGTKRLKAGDSV
LFIRDEKSQLLVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRA
CPSEFVIPLAKHRKAVYGTQVSVGMRFGMMFETEESGKRRYMGTIVGISDIDPLRWPGSK
WRNLQVEWDEPGCSDKQNRVSPWEIETPESLFIFPSLTSGLKRPLHSGFLGGETEWGNLI
KRPLIWLPENGNGNFPYSSIPNTCSERLLKMLMKPHDNHPGIYESALPVIAASKGTPLDD
MKAMQGTVNQMPQLNQSVAMSVENQTYSQFCASQSNAMISSSSKINLPGKLHLPCNLENQ
TADGISNEKLKSEPDHSTDKLSQVTSVGESNEEKSSSSPTNLQNCGNQMDFQNQNQAQLH
AQSSLWSVQPLLEPSGVHPQQINISQADSIPLSGSLPFLDTDEWISNPSCISLPGMYGSS
GPLSMFGLQEQSAGLPDPSIPLMNQGLWDQQLNNLRFLSPGSHLIPLAPQEPCNLNSSGA
KDLSDESNDQSGIYDTLNIDVGNGGSAVIDPSVSNVILDEFCTSKGVDFQNPSDCLVGNF
SSSQDVQSQITSASLADSQAFSQQEFPDSLGGTPSSNVDFEKGNYMQNNSWQQVAPRVRT
YTKVQKAGSVGRSIDVSSFRNYEELCSAIECMFGLEGLLNNPRESGWKLVYVDYENDVLL
IGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNNANIQGLAASVTEGSRA
Download sequence
Identical sequences cassava4.1_001105m|PACid:17990075

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