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Domain assignment for cassava4.1_005196m|PACid:17970764 from Manihot esculenta v147

Domain architecture


Domain assignment details

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Strong hits

Sequence:  cassava4.1_005196m|PACid:17970764
Domain Number 1 Region: 3-99
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.2e-22
Family B3 DNA binding domain 0.0033
Further Details:      
 
Domain Number 2 Region: 419-501
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.0000000000000373
Family PB1 domain 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_005196m|PACid:17970764
Sequence length 537
Sequence
MAQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGK
NGELRVGVRRLARQQSNMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIIS
LNKYLEAINNKFAVGMRFKMRFEGEDSPDRRFSGTIVGVEDFSPHWADSKWRQLKVQWDE
SASIPRPDKVSPWEIEPFSSSVPMNIAQPVAVKNKRPRPPVEIPTLDLSSTAAPPWDSRL
TQSHDLTQMSGTAEGKRKENHFIWHHKQTGINSHSNSISRSPTEGGWLSSPHVNVSRHLF
QEATEDSKSVSNWPVISCYSTPQSAKLKNDTILDPVEKGRKTEAASSYRLFGIELINHST
SSPVEKAPAQPVSVSSGTTEGHVLSTLSATDSDKKSDISKEKKPEHLHVPPKDVQSRQSC
SSSTRSCTKVHMQGVAVGRAIDLTVMKGYDQLLDELEEMFDIRGQLHRREKWEIVYTDDE
GDMMLVGDDPWPEFCNMVRRIFICLSQDVKKTTPGSKLPMFSIEGEGTIVSSNLTDN
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Identical sequences cassava4.1_005196m|PACid:17970764

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