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Domain assignment for cassava4.1_001154m|PACid:17972624 from Manihot esculenta v147

Domain architecture


Domain assignment details

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Strong hits

Sequence:  cassava4.1_001154m|PACid:17972624
Domain Number 1 Region: 112-256
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.03e-48
Family B3 DNA binding domain 0.0061
Further Details:      
 
Domain Number 2 Region: 765-847
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000419
Family PB1 domain 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_001154m|PACid:17972624
Sequence length 943
Sequence
MRLSSVGFNPQTQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKE
VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGAPS
KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRTNRPQTVMPSSVL
SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYFKAVYHTRVSVGMRFRM
LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
TFPMYPSPFPLRLKRPWPPGLPSFHGIKDDDFGMNSPLMWLRGDGDRGIQSMSFQGLGVT
PWMQPRVDASMLGLQTDMYQAMAAAALQEMRAIDPSKSSTTSLLQFQQHPNLPSRTAALM
QPQMLQQPQSQQAFLQGVQENQHQPRTQVQTQSHLVQQQLHSQHSLNGPQQQPQQQQQHP
LSQQQLVEHQQIPNVVSAMSQFASASQSQSPPLPAISSLCQQQSFSDSNGNPVTSSVVSP
MHSLIGSFSQDESTHLINLPRTSALITSSAWPSKRAAVEPLISSGAPQCVLSQVEQLGGP
QTNISQSSVSLPPFPGRECSIDQEGGTDPQSHLLFGFNIEPSSLQLQSGMSSLRGVGSDC
DSTTIPFSSSNYMSTTGTDFSLNPAMTPSSCIDESGFLQSPENVGQVNPPTRTFVKVYKS
GSFGRSLDITKFSSYNELRSELARMFGLEGQLEDPLRSGWQLVFVDRENDVLLLGDDPWP
EFVNSVWCIKILSPQEVQQMGKRGLELLNSVPIQRLSNGSCDDYASRQDSRNLSTEVCCV
SSSVPCSIVVSAGASLHGVDGIEEVGLRRGVIAPTGVAVLEGS
Download sequence
Identical sequences A0A2C9U7J9
cassava4.1_001154m|PACid:17972624

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