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Domain assignment for cassava4.1_001964m|PACid:17967457 from Manihot esculenta v147

Domain architecture


Domain assignment details

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Strong hits

Sequence:  cassava4.1_001964m|PACid:17967457
Domain Number 1 Region: 137-269
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.49e-40
Family B3 DNA binding domain 0.0033
Further Details:      
 
Domain Number 2 Region: 722-789
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000417
Family PB1 domain 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_001964m|PACid:17967457
Sequence length 789
Sequence
MFDVIRVFYFVFPIALLYVLCLCGGACGSDAETALYTELWHACAGPLVTVPRERERVFYF
PQGHIEQVEASTNQLADQQMPVYDLPSKILCTVINVQLKAEPDTDEVFAQVTLLPDPNQD
ESAIDKEAPLPPPRFRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL
MAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR
AMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPAEFIVPVDRYMESI
KNNYSVGMRFKMRFEGEEAPEQRFTGTIVGIEDGDPKRWRESKWRCLKVKWDETSTIPRP
ERVSPWSIEPALAPPALNPLPMPRPKRPRSNMVPSSPDSSVLTREGSSKVTFDPQPPSGY
LRVLQGQEFQTLRGNFAECNESDTVEKSVVWPSSLEDEKVDSVSASSRHGSDWILSGGPK
PTCTDLLSGFGTHVDSSHRFGAHIVDQTSTAASRKLVLEQEGKFNLLASPWSLMSSGLSL
KLSDSNTKVPEKDCDMAFEARGNIRCSAFNEYAMLNGHRVEQSHGNWLMPPPPSHFDNHA
HARELGRKPILVREHEIGKSTDGKCKLFGIRLFNNPVMPESAASHRNLVDDPMSCIHPQS
HQLHVLDSDRSEQSKGSKMADENEYEKQLQAGLLHTSVNQSKVQSVSTRSCTKSGLKSTE
VCLLQVHKQGIVLGRSVDLTKFNNYDELVAELDRLFEFDGELMAPKKNWLIVYTDDEGDM
MLVGDDPWQ
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Identical sequences cassava4.1_001964m|PACid:17967457

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