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Domain assignment for cassava4.1_002969m|PACid:17974504 from Manihot esculenta v147

Domain architecture


Domain assignment details

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Strong hits

Sequence:  cassava4.1_002969m|PACid:17974504
Domain Number 1 Region: 118-257
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.1e-42
Family B3 DNA binding domain 0.0035
Further Details:      
 
Domain Number 2 Region: 555-630
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000000147
Family PB1 domain 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_002969m|PACid:17974504
Sequence length 679
Sequence
MAFTSTNHTPVGHPHAGGCNDALYKELWHACAGPLVNLPRDGERVYYFPQGHMEQLEASM
HQGLEQHMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEP
ERCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNSWHF
RHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQISMPSSV
ISCQSMHLGVLATASHAINTGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKM
RFEGEEVPERRFSGTIVGVGDNMSSGWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV
ASAPSNSQPVQRNKRARPSVLPSPTPNLSALDVWKPPTESPAFSYGDSQRGRDLYPSHNF
STTAKANSLGFSGNSLLSSVSPNSMYWPNRVESVTDSFVPVINKDSGERKQSTGNGYRLF
GIQLVDNSNVEETSPLAVASGMGDDCPIVSLDAESDQNSEPSNINRSEIPSISCEPEKSC
LRSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFECYEDLLMKLEDMFDIEGELSGSTKK
WQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLSPKIKLPVNEEIKATKADG
DPDAAVNMEDQSSVVGPGC
Download sequence
Identical sequences A0A2C9V555
cassava4.1_002969m|PACid:17974504

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