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Domain assignment for cassava4.1_028222m|PACid:17988718 from Manihot esculenta v147

Domain architecture


Domain assignment details

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Strong hits

Sequence:  cassava4.1_028222m|PACid:17988718
Domain Number 1 Region: 232-333
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 8.63e-24
Family B3 DNA binding domain 0.0024
Further Details:      
 
Domain Number 2 Region: 29-124
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.53e-20
Family B3 DNA binding domain 0.0024
Further Details:      
 
Domain Number 3 Region: 382-480
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.1e-16
Family B3 DNA binding domain 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_028222m|PACid:17988718
Sequence length 483
Sequence
MDSCLKKDDGRLVFKSTKPHFFKIILDDTIRSRKLRIHSGDFYVYQGIPRKFVRRYGSEL
SSPVFLKMPSGAKWEIQLLKCDDEIWLTNGWQEFVEYYSLAFGYFLIFEFEQNCHFNVII
MDKSASEIDYPFSIINGNNKEPDLKEELPEQKIEETENVNPLQSRKTKENSPLPFTQPHK
KMKLENPTENTKSHHPTRQSEAKRGKAKDTVRTQPLTAEEKATALHRATANFNSGNPYFM
IALQPSYLNKLSIPASFAREYFIKNREIATLITKDGKTWSVEFCYTVSNRKQSASLGLGW
NKFSQENYLEVGDVCVFELINRSAIRFNVVIFRHIKDTNSSPSLDAGNNKQLNHEESSIC
KPFNPGHSCSKAFEAVEAAKKFSSANPFFKVIIGSYHLEQSLLYVPLNIVAKSTTRRRNN
AMLQVENKRWPVKLFKYPPNSMIAEGWRSFATENFLKVGDVCIFELIANEAVLLKVTIFR
NVD
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Identical sequences cassava4.1_028222m|PACid:17988718

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