SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for cassava4.1_029589m|PACid:17989515 from Manihot esculenta v147

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  cassava4.1_029589m|PACid:17989515
Domain Number 1 Region: 4-84
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.06e-21
Family B3 DNA binding domain 0.0026
Further Details:      
 
Domain Number 2 Region: 179-278
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 8.63e-16
Family B3 DNA binding domain 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_029589m|PACid:17989515
Sequence length 280
Sequence
CVRDHQMLPRKFARQYANSLSNPVTLKLSSGAAWQVELLKNEKDVWLYKGWREFAQHYSL
DIGDTVVFKYEKNSHFHVFICDQNGLEIEYPEDLLKKEGDDEDEDEDGDGDEDEDEDGDG
DEDEDEYGDGDEGEDEYGDEDEDEDEDVIELDCEKIGSKKARLYIFQDGSEPANNFITEN
PSFHLVVKSYHLERENVYVPNSFMQELKDITETENMLLQVADKVKIWPVNVRFYPLKKMG
CITSGFRTFARENSLQPRDVCVFQLISSHVLKVSIFRNAS
Download sequence
Identical sequences cassava4.1_029589m|PACid:17989515

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]